While surveying the military Base where the FLUX TRANSFORMER is being housed, knowing that it can warp time and space, the Turtles ponder as to what Titanus would want with it. Suddenly, they notice assorted military personnel loading it onto a truck and leaving the base. The Turtles need to know where it is going in order to prevent Titanus from getting his hands on it, so April elects to follow it while the Turtles opt to rid the streets of the H.A.V.O.C. mutants. That is until KRAKUS, a cop from the future, arrives and thinking that the Turtles are in league with Titanus, shakes them down for information.
Meanwhile, April continues to track the Flux Transformer as it is off-loaded from the military Truck onto a train, and then in the ""middle of nowhere"", it is air-lifted onto a helicopter.
After April contacts them with the bad news, the TMNT decide to break into the Government Computer Center and access the files pertaining to the Flux Transmitter -- maybe they will learn where